Conferences

conference

Conference Proceedings:

  1. Studying Biomolecular Interactions: A Hybrid Approach.
    McKenna, S. A., Koch, M., Bujnicki, J. M., Stetefeld, J. and Patel, T. R.
    61st Annual Meeting, Biophysical Society, New Orleans, USA, Feb 11-15, 2017. Biophysical Journal 112, 485a
  2. LAR protein tyrosine phosphatase enhances PDGF β-receptor signaling by the inhibition of G-protein-coupled receptor kinase 2.
    Sarhan, A. R., Patel, T. R., Tomlinson, M. G., Hellberg, C., Heath, J. K., Cunningham, D. L. and Hotchin N. A.
    40th FEBS Congress, The Biochemical Basis of Life, Berlin, Germany, Jul 4-9, 2015. FEBS Journal, 282 (292-292)
  3. Mapping of netrin-1 binding to its dependence receptors.
    Meier, M., Patel, T. R., Nikodemus, D., Reuten, R., Koch, M. and Stetefeld, J.
    58th Annual Meeting – Biophysical Society, San Diego, USA, Feb 15-19, 2014. Biophysical Journal 106, 466-479
  4. Interaction studies of N-terminal/N-terminal-like laminins and their respective disease-causing point mutations.
    Nikodemus, D., Reuten, R., Patel, T. R., Stetefeld, J. and Koch, M.
    Joint Spring Meeting of the British-Society-for-Matrix-Biology (BSMB), Oxford, United Kingdom, Apr 4-6, 2012. International Journal of Experimental Pathology, 94 (1), A38-A39
  5. Solution conformation of extracellular matrix proteins.
    Patel, T. R., and Stetefeld, J.
    56th Annual Meeting, Biophysical Society, San Diego, USA, Feb 25-29, 2012. Biophysical Journal, 102, 381a
  6. G4 quadruplex recognition in the human DEAH-BOX helices RHAU.
    Meier, M., Xiong, S., Okun, N., Patel, T. R., Booy, E., McKenna, S. and Stetefeld, J.
    56th Annual Meeting, Biophysical Society, San Diego, USA, Feb 25-29, 2012. Biophysical Journal 102, 486a
  7. Oral Presentations:

    1. Viral RNA-Host Protein Interactions: A Structural-Biophysics Approach.
      Mrozowich, T., Quiroga, M., Vigar, J., Stephenson, S., Bird, E., Owens, R. J. Wieden, H. J. and Patel, T. R.
      3rd Li Ka Shin Instititue of Virology ‘Alberta Virology Conference’, Edmonton, Canada, Jun 1-2, 2017.
    2. Studying Biomolecular Interactions: A Hybrid Approach.
      McKenna, S. A., Koch, M., Bujnicki, J. M., Stetefeld, J. and Patel, T. R.
      61st Annual Meeting, Biophysical Society, New Orleans, USA, Feb 11-15, 2017.
    3. Structural insights of Protein-Protein and Protein-RNA Complexes.
      McKenna, S. A., Bujnicki, J. M., Stetefeld, J. and Patel, T. R.
      Sardar Patel University, Vallabh Vidhyanagar, India, Dec 24, 2016.
    4. Recognition of West Nile Virus 5’ and 3’ Terminal Regions by Host OAS1 Enzyme.
      Deo, S., Chojnowski., G, Bujnicki, J. M., McKenna, S. A. and Patel, T. R.,
      Gairdner Symposium 2016, RNA Meets DNA: From molecules to medicine, University of Lethbridge, Lethbridge, Canada, Nov 14-15, 2016
    5. The role of central stem-loop of VAI RNA in protein kinase R inhibition.
      Dzananovic, E., A., Chojnowski, G., Deo, D., Booy, E. P., McEleney, K., Bujnicki, J. M., McKenna, S. A. and Patel, T. R.
      RiboWest 2016, University of Lethbridge, Lethbridge, Canada, Jun 5-8, 2016
    6. Macromolecular Assemblies in Solution.
      Patel, T. R.
      Department of Chemistry & Biochemistry, University of Lethbridge, Nov 25, 2014
    7. Application of solution X-ray scattering to study RNA-Protein Complexes.
      Patel, T. R., Dzananovic, E., Booy, E., Meier, M., Deo, S., Stetefeld, J. and McKenna, S.
      RiboWest 2013, University of Northern British Columbia, Prince George, Canada, May 23-24, 2013
    8. Interaction of RHAU with G4 quadruplexes.
      Patel, T. R., Meier, M., Booy, E., Okun, N., Xiong, S., Stetefeld, J. and McKenna S.
      RiboWest 2012, University of Lethbridge, Lethbridge, Canada, Jun 10-13, 2012
    9. Studying protein-nucleic acid complexes using small angle X-ray scattering.
      Patel, T. R., Stetefeld, J. and McKenna, S.
      MICH Research Rounds, University of Manitoba, Winnipeg, Canada, Jun 7, 2012
    10. Small angle X-ray scattering studies on extracellular matrix proteins.
      Patel, T. R. and Stetefeld, J.
      20th International Analytical Ultracentrifugation Conference, San Antonio, USA,Mar 25-30, 2012
    11. Towards structural analysis of Wnt proteins.
      Patel, T. R., Ozbek, S. and Stetefeld, J.
      1st Symposium on Higher Order Structure of Protein Therapeutics, Rockville, MD, Sep 26-28, 2011
    12. Solution conformation of laminin γ-1 short arm.
      Patel, T. R., Morris, G. A., Zwolanek, D., Koch, M., Harding, S. E. and Stetefeld, J.
      19th International AUC Conference, Nottingham, United Kingdom, Sep 12-16, 2010
    13. Studying nanoscale structures of proteins.
      Patel, T. R. and Stetefeld, J.
      Manitoba Group in Protein Structure and Function, Winnipeg, Canada, Apr 28, 2010
    14. Biophysical Characterization of the G3 Domain of Agrin Fused with an IgGFc Domain.
      Patel, T. R., Meier, M., Ang, S., Rowe, A., Li, J., Ruegg, M. and Stetefeld, J.
      American Crystallographic Association Meeting, Toronto, Canada, Jul 25-30, 2009
    15. Investigation of miniagrin as a therapeutic agent.
      Patel, T. R. and Stetefeld, J.
      MICH Research Rounds, University of Manitoba, Winnipeg, Canada, Feb 2, 2009
    16. Solution properties of γ-irradiated xyloglucan.
      Patel, T. R., Ebringerová, A., Vodeničarová, M., Garcia de la Torre, J. and Harding S. E.
      15th International symposium on analytical ultracentrifugation, London, United Kingdom, Apr 6-7, 2006
    17. On the dilute solution properties of  γ-irradiated tamarind xyloglucan.
      Patel, T. R., Ebringerová, A., Vodeničarová, M., Garcia de la Torre, J. and Harding S. E.
      WP3 workshop organised by European Polysaccharide Network of Excellence, Lodz, Poland, Apr 4-5, 2006
    18. Characterization of modified starches.
      Patel, T. R., Harding S. E. and Heinze, T.
      COST D 28 action: “Therapeutic polysaccharides II. Bioactive Polysaccharides and Their Structure – Function Relationship”, Jena, Germany, Feb 18-19, 2005

    Poster Presentations: (* indicates presenting author)

    1. RNA-Protein Interactions Using Hydrodynamic and Computational Methods.
      McKenna, S. A., Bujnicki, J. M. and Patel, T. R.*.
      Noncoding RNAs: From Disease to Targeted Therapeutics, Keystone Symposium, Banff, Canada, Feb 5-7, 2017
    2. Structural insight into Netrin-4 mediated basement membrane assembly.
      McDougall, M.*, Reuten, M., Patel, T. R., Meier, M., Nikodemus, D., Poole, K., Dick, M., Koch, M. and Stetefeld, J.
      Protein Structure, Function and Malfunction (PSFaM) Meeting, University of Saskatchewan, Canada, Jul 23-24, 2016
    3. Structural and Biophysical Characterization of Prohibitin.
      Trieu, B.*, Orriss, G., Patel, T. R., Meier, M., Mishra, M. and Stetefeld, J.
      Protein Structure, Function and Malfunction (PSFaM) Meeting, University of Saskatchewan, Canada, Jul 23-24, 2016
    4. Investigation of the C-terminal region of VDAC.
      Ferens, F. G.*, Orriss, G., Patel, T. R., Court, D., Stetefeld, J.
      Protein Structure, Function and Malfunction (PSFaM) Meeting, University of Saskatchewan, Canada, Jul 23-24, 2016
    5. Folding up BC200: the dynamic structure of a cytoplasmic RNA.
      Padilla-Meier, G. P.*, Booy, E., Meier, M., Patel, T. R., Stetefeld, J. and McKenna, S. A.
      RiboWest 2016, University of Lethbridge, Lethbridge, Canada, Jun 5-8, 2016
    6. Structural insight into Netrin-4 mediated basement membrane assembly.
      McDougall, M.*, Reuten, M., Patel, T. R., Meier, M., Nikodemus, D., Poole, K., Dick, M., Koch, M. and Stetefeld, J.
      2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada. Jun 1-3 2016
    7. The transition of disorder to order state of HMGA2 with replication fork DNA.
      Krahn, N.*, Patel, T. R., Meier, M., To, V., Natarajan, S., Klonisch, T. and Stetefeld, J.
      2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada. Jun 1-3 2016
    8. Investigation of the C-terminal region of VDAC.
      Ferens, F. G.*, Orriss, G., Patel, T. R., Court, D., Stetefeld, J.
      2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada. Jun 1-3 2016
    9. Characterisation of interaction between dsRNA-binding protein kinase and its inhibitor adenovirus virus-associated (VA) RNA I.
      Dzananovic, E.*, Patel, T. R., Astha, Chojnowski, G., Bujnicki, J. M., McKenna, S. A.
      2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada. Jun 1-3 2016
    10. Folding up BC200: the dynamic structure of a cytoplasmic RNA.
      Padilla-Meier, G. P.*, Booy, E., Meier, M., Patel, T. R., Stetefeld, J. and McKenna, S. A.
      2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada, Jun 1-3, 2016
    11. High-resolution structure of a DNA G-quadruplex with cytosine bulge.
      Meier, M.,* Moya, A., Krahn, N., McDougall, M., Booy, E., Patel, T. R., McKenna, S. A. and Stetefeld, J.
      2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada, Jun 1-3, 2016
    12. High-Resolution Structure of a DNA G-Quadruplex With Cytosine Bulge.
      Meier, M.,* Moya, A., Krahn, N., Patel, T. R., Booy, E., McKenna, S. A. and Stetefeld, J.
      60th Annual Meeting, Biophysical Society, Los Angeles, USA, Mar 7-11, 2016
    13. Quantitative Phosphoproteomics Reveals A Key Role for LAR Protein Tyrosine Phosphatase in CDK1 Regulated Cell Adhesion.
      Sarhan, A. R.,* Patel, T. R., Tomlinson, M. G., Hellberg, K., Heath, J. K., Cunningham, D. L. and Hotchin, N. A.
      British Society for Proteome Research 2015, Reading, United Kingdom, Jul 20-22, 2015
    14. LAR protein tyrosine phosphatase regulates focal adhesion via CDK1.
      Sarhan, A. R.*, Patel, T. R., Tomlinson, M. G., Hellberg, K., Heath, J. K., Hotchin, N. A. and Cunningham, D. L.
      Europhosphatase 2015: Phosphorylation switches and cellular homeostasis, Turku, Finland, Jun 24 – 29 2015
    15. Quantitative phosphoproteomics reveals cell signalling pathways regulated by LAR protein tyrosine phosphatase.
      Sarhan, A. R., Patel, T. R., Tomlinson, M. G., Hellberg, K., Heath, J. K., Hotchin, N. A. and Cunningham, D. L.*
      Europhosphatase 2015: Phosphorylation switches and cellular homeostasis, Turku, Finland, Jun 24 – 29 2015
    16. Biophysical characterization of interaction between dsRNA-binding protein kinase and its inhibitor Adenovirus virus-associated (VA) RNA I.
      Dzananovic, E.,* Patel, T. R., Chojnowski, G., Boniecki, M. J., Deo, S., McEleney, K., Harding, S. E., Bujnicki, J. M. and Sean A. McKenna.
      RiboWest 2015, Edmonton, Canada, Jun 8-10, 2015
    17. Investigating solution conformation of the 3′-terminal regions (3′-TR) of the WNV genome and its interaction with both the 5′-TR and OAS1.
      Deo, S.,* Patel, T. R., Dzananovic, E., McEleney, K. and Sean A. McKenna.
      Manitoba Materials Conference, Winnipeg, Canada, May 12, 2015
    18. Mapping of Netrin-1 Binding to its Dependence Receptors.
      Meier, M., Patel, T. R., Nikodemus, D., Reuten, R., Koch, M. and Stetefeld J.*
      Protein Structure, Function and Malfunction (PSFaM) Meeting, University of Saskatchewan, Canada, May 7-8, 2015
    19. Characterization of the 3′ terminal region RNA of the West Nile virus genome and its interaction with the small isoform of 2′ 5′ oligoadenylate synthetases.
      Deo, S.,* Patel, T. R., Chojnowski, G., Dzananovic, E., Koul, A., McEleney, K., Bujnicki, J. and McKenna S.
      Protein Structure, Function and Malfunction (PSFaM) Meeting, University of Saskatchewan, Canada, May 7-8, 2015
    20. Solution conformation of adenovirus virus associated RNA-I and its interaction with PKR.
      Dzananovic, E.,* Patel, T. R., Chojnowski, G., Boniecki, M., Deo, S., McEleney, K. Bujnicki, J. and McKenna, S.
      The Nineteenth Annual Meeting of the RNA Society, Quebec City, Canada, Jun 3-8, 2014
    21. Identification of novel G-quadruplexes recognized by the helicase RHAU, a human quadruplex resolvase.
      Booy, E.,* McRae E., Marushchak, O., Ariyo, E., Patel, T., Meier, M., Stetefeld, J. and McKenna, S.
      The Nineteenth Annual Meeting of the RNA Society, Quebec City, Canada, Jun 3-8, 2014
    22. Interaction of OAS1 with the 5′ and 3′ terminal region RNAs of West Nile virus.
      Deo, S.,* Patel, T. R., Dzananovic, E., Booy, E., McEleney, K. and McKenna, S.
      The Nineteenth Annual Meeting of the RNA Society, Quebec City, Canada, Jun 3-8, 2014
    23. Effect of N-glycosylation on the structure and function of a heavy chain monoclonal antibody.
      Okun, N.,* Spearman, M., Patel, T., Meier, M., Dorion-Thibaudeau, J., De Crescenzo, G., Butler, M. and Stetefeld, J.
      Protein Structure, Function and Malfunction (PSFaM) Meeting, Canada, Jun 15-16, 2013
    24. Recognition of G4 quadruplexes by DEaH-box helicase RHAU.
      Marushchak, O.,* Meier, M., Patel, T., Booy, E., Okun, N., McKenna, S. and Stetefeld, J.
      Protein Structure, Function and Malfunction (PSFaM) Meeting, Canada, Jun 15-16, 2013
    25. Regulation of human telomerase by the helicase RHAU, a quadruplex resolvase.

      Booy, E., Meier, M., Patel, T., Howard, R., Okun, N., Marushchak, O., Stetefeld, J. and McKenna, S.*
      
RNA Society Meeting, Switzerland, Jun 11-16, 2013
    26. Biophysical characterization of the recombinant S. cerevisiae Lsm2-8 complex.
      Dunn, E., Patel, T., Fahlman, R., Yip, C., McKenna, S. and Rader, S.*
      
RNA Society Meeting, Switzerland, June 11-16, 2013
    27. Solution conformation of Viral RNA-host protein Complexes.

      Dzananovic, E.,* Patel, T. R. and McKenna, S.
      Small Angle Neutron and X-ray Scattering from proteins in solution conference and practical course. European Photon and Neutron Science Campus Grenoble, France, May 6-10, 2013
    28. Characterizing dsRNA-binding domain of PKR interactions with dsRNA partners by Small ANgle X-ray Scattering.

      Dzananovic, E.,* Patel, T. R., Deo, S. and McKenna, S.
      RiboWest 2012, University of Lethbridge, Canada, Jun 10-13, 2012
    29. Investigating 2’-5’-oligoadenylate synthetase regulation by the untranslated regions of the West Nile virus genome.

      Deo, S.,* Patel, T. R., Zeid, K. and McKenna, S.
      RiboWest 2012, University of Lethbridge, Canada, Jun 10-13, 2012
    30. DHX36 (RHAU) regulates telomere maintenance by binding a G4-Quadruplex in the human telomerase RNA.
      
Booy, E.,* Okun, M., Meier, M., Patel, T., Stetefeld, J. and McKenna, S.

      RiboClub 2011 Annual Meeting, Quebec, Canada, Oct 14, 2011
    31. Towards a structural analysis of Hydra Wnt3A.
      Patel, T. R.,* Özbek, S. and Stetefeld, J.

      Wnt Symposium 2010, University of Heidelberg, Heidelberg, Germany, Oct 25-26, 2010
    32. Exploring the solution conformations of the extracellular matrix proteins.
      Patel, T. R.* and Stetefeld, J.

      6th Child Health Research Day, University of Manitoba, Winnipeg, Canada, Oct 14, 2010
    33. Towards the atomic structure of Tenascin C assembly domain.
      
Meier, M.,* Patel, T. R., Özbek, S. and Stetefeld, J.

      American Crystallographic Association Meeting, Toronto, Canada, Jul 25-30, 2009
    34. Absence of a catalytic water confers resistance to the neurotoxin gabaculine.

      Stetefeld, J.,* Orriss, G. and Patel, T. R.
      American Crystallographic Association Meeting, Toronto, Canada, Jul 25-30, 2009
    35. New insights into the solution flexibility of Biopharma relevant galactomannans.

      Patel, T. R.,* Morris, G. A. and Harding, S. E.
      bioProcess UK conference, Edinburgh, United Kingdom, Nov 29-30, 2006
    36. Structure – functional properties of bioactive cereal bran heteroxylan. 
      Patel, T. R.,* Deszczynski, M., Ebringerová, A., Hromadkova, Z. and Harding, S. E.

      23rd International carbohydrate symposium, Whistler, Canada, Jul 23-28, 2006
    37. Dilute solution properties of γ-irradiated xyloglucan studied using hydrodynamic techniques.
      Patel, T. R.,* Deszczynski, M., Ebringerová, A., Vodeničarová, M. and Harding, S. E.

      COST D28 training school and workshop on “Natural products as a source for discovery, synthesis and application of new pharmaceuticals”, Ischia, Italy, Oct 19-23, 2005
    38. Wheat bran heteroxylan-phenolic complexes and associated antioxidant activity.

      Hromádková Z.,* Malovíková A., Ebringerová A., Vrchotová N., Patel, T. and Harding, S. E.

      13th European Carbohydrate Symposium, Bratislava, Slovakia, Aug 21-26, 2005
    39. Hydrodynamic characterization of phenoloic-acid containing arabinoxylans from wheat bran.
      Patel, T. R.,* Deszczynski, M., Ebringerová, A., Hromadkova, Z. and Harding, S. E.

      Symposium on “Infection, Immunity and Health” organized by Canadian Institute of Health Research, University of Manitoba, Winnipeg, Canada, Jun 7-9, 2005
    40. Conformational analysis of guar galactomannan using hydrodynamic techniques.
      Patel, T. R.,* Harding, S. E., Garcia de la Torre, J., Picout, D. R. and Ross-Murphy, S. B.

      14th International symposium on analytical ultracentrifugation, Lausanne, Switzerland, Mar 3-4, 2005
    41. Conformational analysis of galactomannans using hydrodynamic techniques and global modeling approach.

      Patel, T. R.,* Harding, S. E., Garcia de la Torre, J., Picout, D. R. and Ross-Murphy, S. B.
      Workshop on “Natural products as a source for discovery, synthesis and application of new pharmaceuticals”, Siena, Italy, Oct 21-24, 2004

    Conferences/Workshops Attended:

    1. Protein Structure, Function and Malfunction (PSFaM) Meeting
      University of Saskatchewan, Canada, Jul 23-24, 2016
    2. 2nd Annual Meeting of the Biophysical Society of Canada, Winnipeg, Canada. Jun 1-3 2016
    3. 27th UK RNA Polymerase Workshop
      University of Birmingham, United Kingdom, Apr 20-21, 2015
    4. Actin 2014
      University of Bristol, United Kingdom, Nov 28, 2014
    5. M5 Biomedical Imaging Event
      University of Nottingham, United Kingdom, Sep 9, 2014
    6. IUCR 2014
      Montreal, Canada, Aug 5-12, 2014
    7. ESOF 2014 Marie Skłodowska-Curie actions (MSCA) Conference
      Copenhagen, Denmark, Jun 9-20 2014
    8. Building The Extracellular Matrix: Molecules, Cells and Evolution, BSMB
      University of Bristol, United Kingdom, Apr 7-8, 2014
    9. Exchange Fellowship Workshop
      Royal Society of Chemistry, United Kingdom, Dec 9-10, 2013
    10. Actin 2013
      University of Bristol, United Kingdom, Dec 6, 2013
    11. The Medici – Enterprise Training Programme
      University of Birmingham, United Kingdom, Oct 2013 – Dec 2013
    12. Macromolecular Structure: 25th Anniversary Meeting of the NCMH
      University of Nottingham, Nottingham, United Kingdom, Sep 13, 2012
    13. WNT Signaling in Physiology and Disease
      Karolinska Instituted, Stockholm, Sweden, Oct 27-30, 2010
    14. Biacore Instrument Training by GE Healthcare
      John Buhler Research Centre, University of Manitoba, Winnipeg, Canada, Apr 28-30, 2009
    15. Mass Spectrometry & Proteomics conference
      University of Manitoba, Winnipeg, Canada, Oct 15, 2008
    16. COST D28 working group meeting
      NCMH, Nottingham, University of Nottingham, United Kingdom, May 18-19, 2006
    17. “Glycomics: from glycobiology to diagnostics and therapeutics”
      London, United Kingdom, Dec 13-14, 2005
    18. 2nd International pharmaceutical and Biotech outsourcing research and development exhibition and conference
      PABORD 05, Olympia 2, London, United Kingdom from Sep 14-15, 2005
    19. Workshop on “Understanding polysaccharide Biotechnology”
      the University of Nottingham, United Kingdom, Apr 18-19, 2005
    20. Workshop on “Hydrodynamic and thermodynamic sedimentation analysis with SEDFIT and SEDPHAT”
      Lausanne, Switzerland, Mar 1-2, 2005
    21. 7th UK/ European analytical ultracentrifuge conference
      Oxford, United Kingdom, Mar 31– Apr 2, 2004
    22. COST D 28 working group meeting
      Farmasøytisk institutt, Universitetet I Oslo, Oslo, Norway, Jan 9-11, 2004
    23. Seminar on “Intermolecular associations in 2D and 3D”
      University of Nottingham, Nottingham, United Kingdom, Jun 19-20, 2003